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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "causalBatch" in publications use:'
type: software
license: MIT
title: 'causalBatch: Causal Batch Effects'
version: 1.3.0
identifiers:
- type: doi
  value: 10.32614/CRAN.package.causalBatch
abstract: Software which provides numerous functionalities for detecting and removing
  group-level effects from high-dimensional scientific data which, when combined with
  additional assumptions, allow for causal conclusions, as-described in our manuscripts
  Bridgeford et al. (2024) <https://doi.org/10.1101/2021.09.03.458920> and Bridgeford
  et al. (2023) <arXiv:2307.13868>. Also provides a number of useful utilities for
  generating simulations and balancing covariates across multiple groups/batches of
  data via matching and propensity trimming for more than two groups.
authors:
- family-names: Bridgeford
  given-names: Eric W.
  email: ericwb95@gmail.com
preferred-citation:
  type: manual
  title: '(causalBatch): Causal Batch Effects'
  authors:
  - family-names: Bridgeford
    given-names: Eric W.
    email: ericwb95@gmail.com
  - family-names: Powell
    given-names: Michael
  - family-names: Caffo
    given-names: Brian
  - family-names: Vogelstein
    given-names: Joshua T.
  notes: R-package version 1.0
  year: '2024'
repository: https://neurodata.r-universe.dev
repository-code: https://github.com/neurodata/causal_batch
commit: 8fb2c6a4606a66133c9eb5f0535c7896ef690a86
url: https://github.com/neurodata/causal_batch
date-released: '2024-10-14'
contact:
- family-names: Bridgeford
  given-names: Eric W.
  email: ericwb95@gmail.com
references:
- type: article
  title: 'A Causal Perspective for Batch Effects: When is no answer better than a
    wrong answer?'
  authors:
  - family-names: Bridgeford
    given-names: Eric W.
  - family-names: Powell
    given-names: Michael
  - family-names: Kiar
    given-names: Gregory
  - family-names: Noble
    given-names: Stephanie
  - family-names: Chung
    given-names: Jaewon
  - family-names: Panda
    given-names: Sambit
  - family-names: Lawrence
    given-names: Ross
  - family-names: Xu
    given-names: Ting
  - family-names: Milham
    given-names: Michael
  - family-names: Caffo
    given-names: Brian
  - family-names: Vogelstein
    given-names: Joshua T.
  journal: bioRxiv
  year: '2024'
  doi: 10.1101/2021.09.03.458920
  start: 2021.09.03.458920
- type: article
  title: Learning sources of variability from high-dimensional observational studies
  authors:
  - family-names: Bridgeford
    given-names: Eric W.
  - family-names: Chung
    given-names: Jaewon
  - family-names: Gilbert
    given-names: Brian
  - family-names: Panda
    given-names: Sambit
  - family-names: Li
    given-names: Adam
  - family-names: Shen
    given-names: Cencheng
  - family-names: Badea
    given-names: Alexandra
  - family-names: Caffo
    given-names: Brian
  - family-names: Vogelstein
    given-names: Joshua T.
  journal: arXiv
  year: '2023'
  doi: 10.48550/arXiv.2307.13868