Bridgeford EW, Powell M, Caffo B, Vogelstein JT (2024). (causalBatch): Causal Batch Effects. R-package version 1.0.

Bridgeford E, Powell M, Kiar G, Noble S, Chung J, Panda S, Lawrence R, Xu T, Milham M, Caffo B, Vogelstein J (2025). “When no answer is better than a wrong answer: A causal perspective on batch effects.” Imaging Neuroscience, 3. doi:10.1162/imag_a_00458.

Bridgeford EW, Chung J, Gilbert B, Panda S, Li A, Panda S, Shen C, Badea A, Caffo B, Vogelstein JT (2023). “Learning sources of variability from high-dimensional observational studies.” arXiv. doi:10.48550/arXiv.2307.13868.

Corresponding BibTeX entries:

  @Manual{cb-package,
    title = {(causalBatch): Causal Batch Effects},
    author = {Eric W. Bridgeford and Michael Powell and Brian Caffo and
      Joshua T. Vogelstein},
    note = {R-package version 1.0},
    year = {2024},
  }

  @Article{caus_ccombat-paper,
    title = {When no answer is better than a wrong answer: A causal
      perspective on batch effects},
    author = {Eric W. Bridgeford and Michael Powell and Gregory Kiar
      and Stephanie Noble and Jaewon Chung and Sambit Panda and Ross
      Lawrence and Ting Xu and Michael Milham and Brian Caffo and
      Joshua T. Vogelstein},
    journal = {Imaging Neuroscience},
    volume = {3},
    year = {2025},
    month = {jan},
    publisher = {MIT Press},
    doi = {10.1162/imag_a_00458},
  }

  @Article{caus_cdcorr-paper,
    title = {Learning sources of variability from high-dimensional
      observational studies},
    author = {Eric W. Bridgeford and Jaewon Chung and Brian Gilbert and
      Sambit Panda and Adam Li and Sambit Panda and Cencheng Shen and
      Alexandra Badea and Brian Caffo and Joshua T. Vogelstein},
    journal = {arXiv},
    year = {2023},
    doi = {10.48550/arXiv.2307.13868},
  }